• Accountable Human Subject Research Data Processing using Lohpi 

      Sharma, Aakash; Bye Nilsen, Thomas; Brenna, Lars; Johansen, Dag; Johansen, Håvard D. (Conference object; Konferansebidrag, 2021-06)
      In human subject research, various data about the studied individuals are collected. Through re-identification and statistical inferences, this data can be exploited for interests other than the ones the subjects initially consented to. Such exploitation must be avoided to maintain trust with the researched population. We argue that keeping data-access policies up-to-date and building accountability ...
    • Áika: A Distributed Edge System for AI Inference 

      Alslie, Joakim Aalstad; Ovesen, Aril Bernhard; Nordmo, Tor-Arne Schmidt; Johansen, Håvard D.; Halvorsen, Pål; Riegler, Michael; Johansen, Dag (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-06-17)
      Video monitoring and surveillance of commercial fisheries in world oceans has been proposed by the governing bodies of several nations as a response to crimes such as overfishing. Traditional video monitoring systems may not be suitable due to limitations in the offshore fishing environment, including low bandwidth, unstable satellite network connections and issues of preserving the privacy of crew ...
    • Compliant Sharing of Sensitive Data with Dataverse and Lohpi 

      Sharma, Aakash; Nilsen, Thomas Bye; Johansen, Håvard D. (Conference object; Konferansebidrag, 2021-06)
    • A comprehensive analysis of classification methods in gastrointestinal endoscopy imaging 

      Jha, Debesh; Ali, Sharib; Hicks, Steven; Thambawita, Vajira L B; Borgli, Hanna; Smedsrud, Pia H.; de Lange, Thomas; Pogorelov, Konstantin; Wang, Xiaowei; Harzig, Philipp; Tran, Minh-Triet; Meng, Wenhua; Hoang, Trung-Hieu; Dias, Danielle; Ko, Tobey H.; Agrawal, Taruna; Ostroukhova, Olga; Khan, Zeshan; Tahir, Muhammed Atif; Liu, Yang; Chang, Yuan; Kirkerød, Mathias; Johansen, Dag; Lux, Mathias; Johansen, Håvard D.; Riegler, Michael; Halvorsen, Pål (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-02-19)
      Gastrointestinal (GI) endoscopy has been an active field of research motivated by the large number of highly lethal GI cancers. Early GI cancer precursors are often missed during the endoscopic surveillance. The high missed rate of such abnormalities during endoscopy is thus a critical bottleneck. Lack of attentiveness due to tiring procedures, and requirement of training are few contributing factors. ...
    • A Comprehensive Study on Colorectal Polyp Segmentation with ResUNet++, Conditional Random Field and Test-Time Augmentation 

      Jha, Debesh; Smedsrud, Pia; Johansen, Dag; de Lange, Thomas; Johansen, Håvard D.; Halvorsen, Pål; Riegler, Michael Alexander (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-01-05)
      Colonoscopy is considered the gold standard for detection of colorectal cancer and its precursors. Existing examination methods are, however, hampered by high overall miss-rate, and many abnormalities are left undetected. Computer-Aided Diagnosis systems based on advanced machine learning algorithms are touted as a game-changer that can identify regions in the colon overlooked by the physicians ...
    • Designing a Service for Compliant Sharing of Sensitive Research Data 

      Sharma, Aakash; Bye Nilsen, Thomas; Johansen, Sivert; Johansen, Dag; Johansen, Håvard D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-09)
      Data-driven research is increasingly becoming fueled by access to open datasets, often shared publicly on the Internet. However, many research projects study sensitive data. They cannot easily participate in this shift as access to their data is significantly controlled by ethical and regulatory constraints. This paper discusses the requirements for building a service that enables sensitive data for ...
    • DoubleU-Net: A Deep Convolutional Neural Network for Medical Image Segmentation 

      Jha, Debesh; Riegler, Michael Alexander; Johansen, Dag; Halvorsen, Pål; Johansen, Håvard D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-09-01)
      Semantic image segmentation is the process of labeling each pixel of an image with its corresponding class. An encoder-decoder based approach, like U-Net and its variants, is a popular strategy for solving medical image segmentation tasks. To improve the performance of U-Net on various segmentation tasks, we propose a novel architecture called DoubleU-Net, which is a combination of two U-Net ...
    • Dynamically loading mobile/cloud assemblies 

      Pettersen, Robert; Johansen, Håvard D.; Valvåg, Steffen Viken; Johansen, Dag (Journal article; Tidsskriftartikkel; Peer reviewed, 2017-07-20)
      Distributed applications that span mobile devices, computing clusters, and cloud services, require robust and flexible mechanisms for dynamically loading code. This paper describes lady: a system that augments the .net platform with a highly reliable mechanism for resolving and loading assemblies, and arranges for safe execution of partially trusted code. Key benefits of lady are the low latency and ...
    • FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation 

      Jha, Debesh; Riegler, Michael; Johansen, Håvard D.; Johansen, Dag; Rittscher, Jens; Halvorsen, Pål; Ali, Sharib (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-03-25)
      The increase of available large clinical and experimental datasets has contributed to a substantial amount of important contributions in the area of biomedical image analysis. Image segmentation, which is crucial for any quantitative analysis, has especially attracted attention. Recent hardware advancement has led to the success of deep learning approaches. However, although deep learning models are ...
    • File System Support for Privacy-Preserving Analysis and Forensics in Low-Bandwidth Edge Environments 

      Ovesen, Aril Bernhard; Nordmo, Tor-Arne Schmidt; Johansen, Håvard D.; Riegler, Michael Alexander; Halvorsen, Pål; Johansen, Dag (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-10-18)
      In this paper, we present initial results from our distributed edge systems research in the domain of sustainable harvesting of common good resources in the Arctic Ocean. Specifically, we are developing a digital platform for real-time privacy-preserving sustainability management in the domain of commercial fishery surveillance operations. This is in response to potentially privacy-infringing mandates ...
    • Fish AI: Sustainable Commercial Fishing Challenge 

      Nordmo, Tor-Arne Schmidt; Kvalsvik, Ove; Kvalsund, Svein Ove; Hansen, Birte; Halvorsen, Pål; Hicks, Steven; Johansen, Dag; Johansen, Håvard D.; Riegler, Michael Alexander (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-06-02)
      FishAI: Sustainable Commercial Fishingis the second chal-lenge at theNordic AI Meetfollowing the successful MedAI,which had a focus on medical image segmentation and trans-parency in machine learning (ML)-based systems. FishAI fo-cuses on a new domain, namely, commercial fishing and howto make it more sustainable with the help of machine learning.A range of public available datasets is used to tackle ...
    • Information and communication technology-based interventions for chronic diseases consultation: Scoping review 

      Randine, Pietro; Sharma, Aakash; Hartvigsen, Gunnar; Johansen, Håvard D.; Årsand, Eirik (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-29)
      Background: Medical consultations are often critical meetings between patients and health personnel to provide treatment, health-management advice, and exchange of information, especially for people living with chronic diseases. The adoption of patient-operated Information and Communication Technologies (ICTs) allows the patients to actively participate in their consultation and treatment. The ...
    • Kvasir-SEG: A Segmented Polyp Dataset 

      Jha, Debesh; Pia H, Smedsrud; Riegler, Michael; Halvorsen, Pål; de Lange, Thomas; Johansen, Dag; Johansen, Håvard D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-01-24)
      Pixel-wise image segmentation is a highly demanding task in medical-image analysis. In practice, it is difficult to find annotated medical images with corresponding segmentation masks. In this paper, we present Kvasir-SEG: an open-access dataset of gastrointestinal polyp images and corresponding segmentation masks, manually annotated by a medical doctor and then verified by an experienced ...
    • LightLayers: Parameter Efficient Dense and Convolutional Layers for Image Classification 

      Jha, Debesh; Yazidi, Anis; Riegler, Michael Alexander; Johansen, Dag; Johansen, Håvard D.; Halvorsen, Pål (Chapter; Bokkapittel, 2021-02-21)
      Deep Neural Networks (DNNs) have become the de-facto standard in computer vision, as well as in many other pattern recognition tasks. A key drawback of DNNs is that the training phase can be very computationally expensive. Organizations or individuals that cannot afford purchasing state-of-the-art hardware or tapping into cloud hosted infrastructures may face a long waiting time before the training ...
    • Moving psychological assessment out of the controlled laboratory setting: Practical challenges 

      Holmlund, Terje Bektesevic; Foltz, Peter W.; Cohen, Alex S.; Johansen, Håvard D.; Sigurdsen, Randi; Fugeli, Pål; Bergsager, Dagfinn; Cheng, Jian; Bernstein, Jared; Rosenfeld, Elizabeth; Elvevåg, Brita (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-03)
      Behavioral assessment using smart devices affords novel methods, notably remote self-administration by the individuals themselves. However, this new approach requires navigating complex legal and technical terrain. Given the limited empirical data that currently exists, we provide and discuss anecdotes of the methodological, technical, legal, and cultural issues associated with an implementation in ...
    • MSRF-Net: A Multi-Scale Residual Fusion Network for Biomedical Image Segmentation 

      Srivastava, Abhishek; Jha, Debesh; Chanda, Sukalpa; Pal, Umapada; Johansen, Håvard D.; Johansen, Dag; Riegler, Michael; Ali, Sharib; Halvorsen, Pål (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-12-23)
      Methods based on convolutional neural networks have improved the performance of biomedical image segmentation. However, most of these methods cannot efficiently segment objects of variable sizes and train on small and biased datasets, which are common for biomedical use cases. While methods exist that incorporate multi-scale fusion approaches to address the challenges arising with variable ...
    • Njord: a fishing trawler dataset 

      Nordmo, Tor-Arne Schmidt; Ovesen, Aril Bernhard; Juliussen, Bjørn Aslak; Hicks, Steven; Thambawita, Vajira L B; Johansen, Håvard D.; Halvorsen, Pål; Riegler, Michael Alexander; Johansen, Dag (Chapter; Bokkapittel, 2022-08-05)
      Fish is one of the main sources of food worldwide. The commercial fishing industry has a lot of different aspects to consider, ranging from sustainability to reporting. The complexity of the domain also attracts a lot of research from different fields like marine biology, fishery sciences, cybernetics, and computer science. In computer science, detection of fishing vessels via for example remote ...
    • On Optimizing Transaction Fees in Bitcoin using AI: Investigation on Miners Inclusion Pattern 

      Tedeschi, Enrico; Nordmo, Tor-Arne Schmidt; Johansen, Dag; Johansen, Håvard D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-09)
      The transaction-rate bottleneck built into popular proof-of-work-based cryptocurrencies, like Bitcoin and Ethereum, leads to fee markets where transactions are included according to a first-price auction for block space. Many attempts have been made to adjust and predict the fee volatility, but even well-formed transactions sometimes experience unexpected delays and evictions unless a substantial ...
    • Performance principles for trusted computing with intel SGX 

      Gjerdrum, Anders Tungeland; Pettersen, Robert; Johansen, Håvard D.; Johansen, Dag (Journal article; Tidsskriftartikkel; Peer reviewed, 2018-07-14)
      Cloud providers offering Software-as-a-Service (SaaS) are increasingly being trusted by customers to store sensitive data. Companies often monetize such personal data through curation and analysis, providing customers with personalized application experiences and targeted advertisements. Personal data is often accompanied by strict privacy and security policies, requiring data processing to be ...
    • Predicting peek readiness-to-train of soccer players using long short-term memory recurrent neural networks 

      Wiik, Theodor; Johansen, Håvard D.; Pettersen, Svein Arne; Matias Do Vale Baptista, Ivan Andre; Kupka, Tomas; Johansen, Dag; Riegler, Michael; Halvorsen, Pål (Conference object; Konferansebidrag, 2019-10-21)
      We are witnessing the emergence of a myriad of hardware and software systems that quantifies sport and physical activities. These are frequently touted as game changers and important for future sport developments. The vast amount of generated data is often visualized in graphs and dashboards, for use by coaches and other sports professionals to make decisions on training and match strategies. Modern ...